NDC1 protein (Serinus canaria) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

NDC1

Nucleoporin NDC1 isoform X2. (672 aa)

Predicted Functional Partners:

NUP93

0.987

NUP155

0.983

NUP35

0.979

NUP210

0.979

RANBP2

0.973

NUP205

0.970

NUP85

0.959

NUP188

0.947

NUP43

0.946

NUP50

0.932

Your Current Organism:

Serinus canaria

NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NDC1	NUP155	ENSSCAP00000008071	ENSSCAP00000010832	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup155.	0.983
NDC1	NUP188	ENSSCAP00000008071	ENSSCAP00000006504	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup188.	0.947
NDC1	NUP205	ENSSCAP00000008071	ENSSCAP00000008824	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup205.	0.970
NDC1	NUP210	ENSSCAP00000008071	ENSSCAP00000014561	Nucleoporin NDC1 isoform X2.	Nuclear pore membrane glycoprotein 210 isoform X1.	0.979
NDC1	NUP35	ENSSCAP00000008071	ENSSCAP00000005203	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup53.	0.979
NDC1	NUP43	ENSSCAP00000008071	ENSSCAP00000015535	Nucleoporin NDC1 isoform X2.	Nucleoporin 43.	0.946
NDC1	NUP50	ENSSCAP00000008071	ENSSCAP00000003783	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup50.	0.932
NDC1	NUP85	ENSSCAP00000008071	ENSSCAP00000000939	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup85.	0.959
NDC1	NUP93	ENSSCAP00000008071	ENSSCAP00000006682	Nucleoporin NDC1 isoform X2.	Nuclear pore complex protein Nup93 isoform X3.	0.987
NDC1	RANBP2	ENSSCAP00000008071	ENSSCAP00000005153	Nucleoporin NDC1 isoform X2.	RAN binding protein 2.	0.973
NUP155	NDC1	ENSSCAP00000010832	ENSSCAP00000008071	Nuclear pore complex protein Nup155.	Nucleoporin NDC1 isoform X2.	0.983
NUP155	NUP188	ENSSCAP00000010832	ENSSCAP00000006504	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup188.	0.989
NUP155	NUP205	ENSSCAP00000010832	ENSSCAP00000008824	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup205.	0.999
NUP155	NUP210	ENSSCAP00000010832	ENSSCAP00000014561	Nuclear pore complex protein Nup155.	Nuclear pore membrane glycoprotein 210 isoform X1.	0.986
NUP155	NUP35	ENSSCAP00000010832	ENSSCAP00000005203	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup53.	0.999
NUP155	NUP43	ENSSCAP00000010832	ENSSCAP00000015535	Nuclear pore complex protein Nup155.	Nucleoporin 43.	0.994
NUP155	NUP50	ENSSCAP00000010832	ENSSCAP00000003783	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup50.	0.967
NUP155	NUP85	ENSSCAP00000010832	ENSSCAP00000000939	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup85.	0.996
NUP155	NUP93	ENSSCAP00000010832	ENSSCAP00000006682	Nuclear pore complex protein Nup155.	Nuclear pore complex protein Nup93 isoform X3.	0.999
NUP155	RANBP2	ENSSCAP00000010832	ENSSCAP00000005153	Nuclear pore complex protein Nup155.	RAN binding protein 2.	0.999