STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL37LOW QUALITY PROTEIN: 39S ribosomal protein L37, mitochondrial. (390 aa)    
Predicted Functional Partners:
MRPS30
Mitochondrial ribosomal protein S30.
   
   0.735
MRPL2
39S ribosomal protein L2, mitochondrial.
   
   0.632
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
   0.590
MRPS7
28S ribosomal protein S7, mitochondrial.
   
   0.589
MRPL16
39S ribosomal protein L16, mitochondrial.
   
  0.580
MRPL21
39S ribosomal protein L21, mitochondrial.
   
   0.555
MRPL24
LOW QUALITY PROTEIN: 39S ribosomal protein L24, mitochondrial.
   
   0.550
MRPL40
39S ribosomal protein L40, mitochondrial.
   
   0.550
MRPS25
28S ribosomal protein S25, mitochondrial.
   
   0.550
AURKAIP1
Aurora kinase A-interacting protein.
   
   0.550
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.