STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAG2Protein jagged-2. (1135 aa)    
Predicted Functional Partners:
NOTCH1
Neurogenic locus notch homolog protein 1 isoform X1.
   
0.988
NOTCH2
Neurogenic locus notch homolog protein 2.
   
0.958
ENSSCAP00000011485
annotation not available
   
0.890
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 0.669
EYS
Protein eyes shut homolog.
 
 
 0.613
ENSSCAP00000009332
annotation not available
   
0.599
ENSSCAP00000011466
annotation not available
   
0.599
SUPT6H
Transcription elongation factor SPT6.
    
 0.568
DLL4
Delta-like protein 4 isoform X2.
     
0.529
JAG1
Jagged canonical Notch ligand 1.
  
 
0.525
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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