STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMABCob(I)alamin adenosyltransferase. (217 aa)    
Predicted Functional Partners:
IYD
Iodotyrosine deiodinase 1 isoform X1.
    
 0.802
MMAA
Methylmalonic aciduria type A protein, mitochondrial.
      
 0.682
MMUT
Methylmalonyl-CoA mutase, mitochondrial.
      
 0.681
MMADHC
Methylmalonic aciduria and homocystinuria type D protein, mitochondrial.
      
 0.657
MMACHC
Cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase.
     
 0.656
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X3.
     
 0.654
PPCDC
Phosphopantothenoylcysteine decarboxylase.
     
 0.579
MCEE
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
     
 0.574
UROS
Uroporphyrinogen-III synthase.
  
  
 0.571
LMBRD1
Probable lysosomal cobalamin transporter.
      
 0.561
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.