Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C9orf16UPF0184 protein C9orf16 homolog. (93 aa)    
Predicted Functional Partners:
ATP6V1D
V-type H+-transporting ATPase subunit D.
    
   0.929
KRT20
Keratin, type I cytoskeletal 20.
    
   0.648
LRRC73
Leucine-rich repeat-containing protein 73.
      
 0.585
CEP290
Centrosomal protein 290.
    
   0.576
CNST
Consortin isoform X1.
    
   0.550
ANKRD13D
Ankyrin repeat domain 13D.
      
 0.528
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.528
VSIG10
V-set and immunoglobulin domain containing 10.
   
  
 0.526
ATP6V1E1
V-type H+-transporting ATPase subunit E.
    
   0.498
POLR3H
DNA-directed RNA polymerase III subunit RPC8 isoform X1.
      
 0.448
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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