STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBNO2Protein strawberry notch homolog 2 isoform X1. (1405 aa)    
Predicted Functional Partners:
IL22RA2
Interleukin-22 receptor subunit alpha-2.
      
 0.595
MIDN
Midnolin.
   
  
 0.516
EEF2
Elongation factor 2.
      
 0.447
HDAC3
Histone deacetylase 3.
      
 0.444
ENSSCAP00000017483
annotation not available
      
 0.442
MACO1
Macoilin.
      
 0.436
SH3PXD2A
SH3 and PX domain-containing protein 2A.
      
 0.433
GAL3ST2
Galactose-3-O-sulfotransferase 2.
      
 0.424
FAM174C
Family with sequence similarity 174 member C.
      
 0.413
ENSSCAP00000006086
annotation not available
      
 0.407
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.