Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDCA4Cell division cycle-associated protein 4. (280 aa)    
Predicted Functional Partners:
PPP2R2C
Protein phosphatase 2, regulatory subunit B, gamma isoform X2.
    
   0.929
PPP2R2D
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform.
    
   0.903
ENSSCAP00000000236
annotation not available
    
   0.829
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
   0.674
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
   0.674
SIVA1
Apoptosis regulatory protein Siva isoform X1.
   
  
 0.586
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.528
AKAP17A
LOW QUALITY PROTEIN: A-kinase anchor protein 17A.
      
 0.511
E2F2
Transcription factor E2F2 isoform X3.
   
 
 0.492
GTF3C4
General transcription factor 3C polypeptide 4.
      
 0.483
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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