Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
LGR6Leucine-rich repeat-containing G-protein coupled receptor 6 isoform X1. (983 aa)    
Predicted Functional Partners:
RSPO4
R-spondin 4.
    
 0.957
RSPO3
R-spondin 3.
    
 0.954
RSPO2
R-spondin 2.
    
 0.945
LGR5
Leucine-rich repeat-containing G protein-coupled receptor 5.
  
 
 
0.921
LGR4
Leucine-rich repeat-containing G protein-coupled receptor 4.
  
 
 
0.918
RSPO1
R-spondin 1.
    
 0.917
FSHB
Follitropin subunit beta.
   
 0.699
GPHB5
Glycoprotein hormone beta-5.
     
 0.656
RNF43
E3 ubiquitin-protein ligase RNF43.
    
 0.633
TSHB
Thyroid stimulating hormone subunit beta.
    
 0.593
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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