Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXN4Forkhead box protein N4. (510 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box protein N1 isoform X1.
   
  
 0.930
FOXJ1
Forkhead box protein J1.
   
  
 0.929
SLC37A4
MFS transporter, OPA family, solute carrier family 37 (glycerol-6-phosphate transporter), member 4.
      
 0.769
ENSSCAP00000013538
annotation not available
    
 0.715
SP1
Transcription factor Sp1.
    
 0.710
FOXG1
Forkhead box G1.
   
    0.708
TWIST2
Twist-related protein 2.
   
 
 0.697
CCDC177
Coiled-coil domain-containing protein 177.
    
 0.696
EWSR1
RNA-binding protein EWS isoform X1.
    
 
 0.693
UBE2I
Ubiquitin-conjugating enzyme E2 I.
    
  0.649
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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