STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IMPG1LOW QUALITY PROTEIN: interphotoreceptor matrix proteoglycan 1. (907 aa)    
Predicted Functional Partners:
ELOVL4
Elongation of very long chain fatty acids protein 4.
      
 0.882
CABP4
Calcium-binding protein 1/2/4/5.
      
 0.682
ADGRD2
Adhesion G protein-coupled receptor D2.
      
 0.681
GUCA1B
Guanylyl cyclase-activating protein 2.
    
 
 0.663
IDUA
Alpha-L-iduronidase.
      
 0.613
RGCC
Regulator of cell cycle RGCC.
      
 0.613
ENSSCAP00000010915
annotation not available
      
 0.612
TRNAU1AP
TRNA selenocysteine 1-associated protein 1.
      
 0.605
PRPH2
Peripherin-2.
   
  
 0.587
LOC103826639
Photoreceptor outer segment membrane glycoprotein 2.
   
  
 0.587
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.