close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URM1Ubiquitin related modifier 1. (104 aa)    
Predicted Functional Partners:
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
    
 
 0.983
ELP3
Elongator acetyltransferase complex subunit 3.
    
 
 0.706
CTU2
Cytoplasmic tRNA 2-thiolation protein 2 isoform X1.
     
 0.696
ENSSCAP00000002922
annotation not available
      
 0.688
ELP1
Elongator complex protein 1 isoform X2.
    
 
 0.663
TRMT112
Multifunctional methyltransferase subunit TRM112-like protein.
   
  
 0.660
NFS1
Cysteine desulfurase, mitochondrial.
      
 0.658
ELP4
Elongator complex protein 4.
    
 
 0.635
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
    
 
 0.628
MCM5
DNA replication licensing factor MCM5.
      
 0.625
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.