STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000008435annotation not available (65 aa)    
Predicted Functional Partners:
KDM6A
Lysine-specific demethylase 6A isoform X3.
   
 0.919
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.795
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 0.795
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
   
 
 0.755
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1.
   
 0.750
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.747
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
 0.746
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.733
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2.
    
 0.723
H2AZ1
Histone H2A.Z isoform X1.
   
 0.719
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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