STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM20CExtracellular serine/threonine protein kinase FAM20C. (470 aa)    
Predicted Functional Partners:
FAM20A
Pseudokinase FAM20A.
  
 
0.948
FAM20B
Glycosaminoglycan xylosylkinase.
    
0.832
SPP1
Secreted phosphoprotein 1.
    
 0.643
FGF23
Fibroblast growth factor 23.
     
 0.641
FGA
Fibrinogen alpha chain.
    
  0.632
PENK
Proenkephalin A.
    
 0.615
BMP15
Bone morphogenetic protein 15.
    
 0.602
APP
Amyloid-beta precursor protein isoform X1.
    
 0.601
CHGB
Secretogranin-1 isoform X3.
    
  0.600
SCG3
Secretogranin-3 isoform X1.
    
  0.600
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.