STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IAH1Isoamyl acetate-hydrolyzing esterase 1 homolog. (243 aa)    
Predicted Functional Partners:
GMPS
GMP synthase (glutamine-hydrolysing).
    
 0.875
RPP30
Ribonuclease P protein subunit p30 isoform X1.
    
 0.844
POP1
Ribonucleases P/MRP protein subunit POP1.
     
 0.843
POP4
Ribonuclease P protein subunit POP4.
     
 0.843
LSM6
U6 snRNA-associated Sm-like protein LSm6.
   
 
  0.821
GLUD1
Glutamate dehydrogenase 1, mitochondrial isoform X1.
    
 0.787
ENSSCAP00000013123
annotation not available
    
 0.783
FDXR
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
  0.760
FADS6
Fatty acid desaturase 6 isoform X1.
    
  0.760
SHMT1
Serine hydroxymethyltransferase, cytosolic.
   
  
 0.674
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.