STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNT1Cyclin-T1. (680 aa)    
Predicted Functional Partners:
CDK9
Cyclin-dependent kinase 9.
   
 0.998
AFF4
AF4/FMR2 family member 4 isoform X1.
   
 0.993
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.980
AFF1
AF4/FMR2 family member 1 isoform X2.
   
 0.964
CDK7
Cyclin-dependent kinase 7 isoform X1.
   
 
 0.914
ELL
RNA polymerase II elongation factor ELL.
    
 0.912
CCNH
Cyclin H.
     
 0.907
CCNT2
Cyclin-T2 isoform X5.
    
0.895
CDC73
Parafibromin.
   
 0.886
SUPT4H1
Transcription elongation factor SPT4.
    
 0.879
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.