STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103814919Vitellogenin-2-like. (1839 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
   
 
 0.935
APOA1
Apolipoprotein A-I.
   
 0.814
MTTP
Microsomal triglyceride transfer protein large subunit.
   
0.705
LOC103823743
Microsomal triglyceride transfer protein large subunit.
   
 0.705
LOC103827082
Apovitellenin-1-like isoform X2.
  
 
 0.685
ITSN1
Intersectin-1 isoform X1.
   
 
  0.595
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
   
  
 0.543
NPC2
NPC intracellular cholesterol transporter 2.
     
 0.506
VLDLR
Very low-density lipoprotein receptor isoform X1.
    
 0.481
SAMD7
Sterile alpha motif domain-containing protein 7.
  
  
  0.437
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.