STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COILCoilin. (566 aa)    
Predicted Functional Partners:
MED31
Mediator of RNA polymerase II transcription subunit 31.
    
  0.487
UBE2V1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1.
     
 0.470
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
  0.467
MED21
Mediator of RNA polymerase II transcription subunit 21.
    
  0.467
MED7
Mediator of RNA polymerase II transcription subunit 7.
    
  0.467
TRAF7
E3 ubiquitin-protein ligase TRAF7.
   
 0.427
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1.
    
 0.420
TAB3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.420
MED6
Mediator of RNA polymerase II transcription subunit 6.
    
  0.413
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
  
 0.406
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.