STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF103E3 ubiquitin-protein ligase RNF103 isoform X1. (682 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.569
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.501
RNF145
RING finger protein 145.
    
 0.491
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
   
 
 0.480
LGR4
Leucine-rich repeat-containing G protein-coupled receptor 4.
    
 0.413
LGR5
Leucine-rich repeat-containing G protein-coupled receptor 5.
    
 0.413
RXFP1
Relaxin family peptide receptor 1.
    
 0.413
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 0.412
UBE2K
Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).
   
 0.405
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.