STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSF3RColony stimulating factor 3 receptor. (754 aa)    
Predicted Functional Partners:
CSF3
Granulocyte colony-stimulating factor.
    
 0.972
SOCS3
Suppressor of cytokine signaling 3.
   
 0.891
USE1
Unconventional SNARE in the endoplasmic reticulum protein 1.
     
 0.779
JAK2
Tyrosine-protein kinase JAK2.
   
 0.764
SPI1
Transcription factor PU.1.
   
 0.750
ENSSCAP00000021850
annotation not available
   
 
 0.740
STX16
Syntaxin 16.
    
 0.739
VAMP4
Vesicle-associated membrane protein 4.
   
 
 0.738
STX8
Syntaxin 8.
     
 0.738
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
     
 0.738
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.