STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO35452.1FmdE, Molybdenum formylmethanofuran dehydrogenase operon. (99 aa)    
Predicted Functional Partners:
SDO35485.1
Hypothetical protein.
       0.773
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.721
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.715
SDP55240.1
acetyl-CoA decarbonylase/synthase beta subunit.
  
  
 0.670
SDO79434.1
Formylmethanofuran dehydrogenase, subunit E.
  
     0.654
SDP49535.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
  0.620
SDP55258.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
  
  
  0.577
SDP41337.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
    0.563
SDP55218.1
Ni-dependent carbon monoxide dehydrogenase precursor.
  
  
  0.558
SDO38047.1
Protein of unknown function.
  
     0.510
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.