Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO34444.1 | SDO35113.1 | SAMN05660330_00008 | SAMN05660330_00030 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | 0.727 |
SDO34444.1 | SDO35570.1 | SAMN05660330_00008 | SAMN05660330_00046 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Kynurenine formamidase. | 0.780 |
SDO34444.1 | SDO35600.1 | SAMN05660330_00008 | SAMN05660330_00047 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Kynurenine formamidase. | 0.731 |
SDO34444.1 | SDO75661.1 | SAMN05660330_00008 | SAMN05660330_00989 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.656 |
SDO34444.1 | SDP55530.1 | SAMN05660330_00008 | SAMN05660330_03178 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.777 |
SDO34444.1 | SDP67751.1 | SAMN05660330_00008 | SAMN05660330_03652 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.809 |
SDO34895.1 | SDO35113.1 | SAMN05660330_00023 | SAMN05660330_00030 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | 0.719 |
SDO34895.1 | SDO35570.1 | SAMN05660330_00023 | SAMN05660330_00046 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Kynurenine formamidase. | 0.771 |
SDO34895.1 | SDO35600.1 | SAMN05660330_00023 | SAMN05660330_00047 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Kynurenine formamidase. | 0.718 |
SDO34895.1 | SDO75661.1 | SAMN05660330_00023 | SAMN05660330_00989 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.656 |
SDO34895.1 | SDP55530.1 | SAMN05660330_00023 | SAMN05660330_03178 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.786 |
SDO34895.1 | SDP67751.1 | SAMN05660330_00023 | SAMN05660330_03652 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.809 |
SDO35113.1 | SDO34444.1 | SAMN05660330_00030 | SAMN05660330_00008 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.727 |
SDO35113.1 | SDO34895.1 | SAMN05660330_00030 | SAMN05660330_00023 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.719 |
SDO35113.1 | SDO35236.1 | SAMN05660330_00030 | SAMN05660330_00034 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.695 |
SDO35113.1 | SDO35570.1 | SAMN05660330_00030 | SAMN05660330_00046 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | Kynurenine formamidase. | 0.720 |
SDO35113.1 | SDO35600.1 | SAMN05660330_00030 | SAMN05660330_00047 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | Kynurenine formamidase. | 0.652 |
SDO35113.1 | SDP67751.1 | SAMN05660330_00030 | SAMN05660330_03652 | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.828 |
SDO35236.1 | SDO35113.1 | SAMN05660330_00034 | SAMN05660330_00030 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Uncharacterized OB-fold protein, contains Zn-ribbon domain. | 0.695 |
SDO35236.1 | SDO35570.1 | SAMN05660330_00034 | SAMN05660330_00046 | trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Kynurenine formamidase. | 0.774 |
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