STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO38509.1Phospholipid-binding lipoprotein MlaA. (255 aa)    
Predicted Functional Partners:
SDO81321.1
Phospholipid transport system substrate-binding protein.
 
 
 
 0.897
SDP39569.1
Protein of unknown function.
    
 
 0.892
SDP47797.1
Protein of unknown function.
    
 
 0.892
SDP74105.1
Protein of unknown function.
    
 
 0.892
SDP83762.1
Protein of unknown function.
    
 
 0.892
SDO81288.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
   
 0.831
SDO81232.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
   
 0.622
SDO38533.1
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.529
SDO81267.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
   
 0.513
SDO38466.1
Hypothetical protein.
       0.489
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.