Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO39099.1 | SDO39132.1 | SAMN05660330_00161 | SAMN05660330_00162 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Autotransporter secretion outer membrane protein TamA. | 0.500 |
SDO39099.1 | SDO39157.1 | SAMN05660330_00161 | SAMN05660330_00163 | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Autotransporter translocation and assembly factor TamB. | 0.524 |
SDO39132.1 | SDO39099.1 | SAMN05660330_00162 | SAMN05660330_00161 | Autotransporter secretion outer membrane protein TamA. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.500 |
SDO39132.1 | SDO39157.1 | SAMN05660330_00162 | SAMN05660330_00163 | Autotransporter secretion outer membrane protein TamA. | Autotransporter translocation and assembly factor TamB. | 0.999 |
SDO39132.1 | SDO89743.1 | SAMN05660330_00162 | SAMN05660330_01324 | Autotransporter secretion outer membrane protein TamA. | Membrane-bound lytic murein transglycosylase B. | 0.551 |
SDO39132.1 | SDO90659.1 | SAMN05660330_00162 | SAMN05660330_01354 | Autotransporter secretion outer membrane protein TamA. | Dicarboxylate transport. | 0.955 |
SDO39132.1 | SDP25796.1 | SAMN05660330_00162 | SAMN05660330_02219 | Autotransporter secretion outer membrane protein TamA. | Riboflavin synthase alpha chain. | 0.530 |
SDO39132.1 | SDP37202.1 | SAMN05660330_00162 | SAMN05660330_02555 | Autotransporter secretion outer membrane protein TamA. | Paraquat-inducible protein B. | 0.437 |
SDO39132.1 | SDP37225.1 | SAMN05660330_00162 | SAMN05660330_02556 | Autotransporter secretion outer membrane protein TamA. | Paraquat-inducible protein A. | 0.473 |
SDO39132.1 | lptD | SAMN05660330_00162 | SAMN05660330_01322 | Autotransporter secretion outer membrane protein TamA. | LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.553 |
SDO39132.1 | selO | SAMN05660330_00162 | SAMN05660330_00905 | Autotransporter secretion outer membrane protein TamA. | Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. | 0.409 |
SDO39157.1 | SDO39099.1 | SAMN05660330_00163 | SAMN05660330_00161 | Autotransporter translocation and assembly factor TamB. | 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.524 |
SDO39157.1 | SDO39132.1 | SAMN05660330_00163 | SAMN05660330_00162 | Autotransporter translocation and assembly factor TamB. | Autotransporter secretion outer membrane protein TamA. | 0.999 |
SDO39157.1 | SDO89743.1 | SAMN05660330_00163 | SAMN05660330_01324 | Autotransporter translocation and assembly factor TamB. | Membrane-bound lytic murein transglycosylase B. | 0.540 |
SDO39157.1 | SDP37202.1 | SAMN05660330_00163 | SAMN05660330_02555 | Autotransporter translocation and assembly factor TamB. | Paraquat-inducible protein B. | 0.586 |
SDO39157.1 | SDP37225.1 | SAMN05660330_00163 | SAMN05660330_02556 | Autotransporter translocation and assembly factor TamB. | Paraquat-inducible protein A. | 0.455 |
SDO39157.1 | lptD | SAMN05660330_00163 | SAMN05660330_01322 | Autotransporter translocation and assembly factor TamB. | LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.502 |
SDO89743.1 | SDO39132.1 | SAMN05660330_01324 | SAMN05660330_00162 | Membrane-bound lytic murein transglycosylase B. | Autotransporter secretion outer membrane protein TamA. | 0.551 |
SDO89743.1 | SDO39157.1 | SAMN05660330_01324 | SAMN05660330_00163 | Membrane-bound lytic murein transglycosylase B. | Autotransporter translocation and assembly factor TamB. | 0.540 |
SDO89743.1 | lptD | SAMN05660330_01324 | SAMN05660330_01322 | Membrane-bound lytic murein transglycosylase B. | LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.723 |
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