STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO53588.1Trimethylamine---corrinoid protein Co-methyltransferase. (158 aa)    
Predicted Functional Partners:
SDO53560.1
Trimethylamine---corrinoid protein Co-methyltransferase.
     0.945
SDO68042.1
Trimethylamine:corrinoid methyltransferase.
     0.929
SDP34490.1
Trimethylamine---corrinoid protein Co-methyltransferase.
 
     0.904
SDP51242.1
Trimethylamine---corrinoid protein Co-methyltransferase.
     0.898
SDO36357.1
Trimethylamine---corrinoid protein Co-methyltransferase.
     0.870
SDO56597.1
Trimethylamine---corrinoid protein Co-methyltransferase.
  
     0.775
SDO68110.1
Trimethylamine:corrinoid methyltransferase.
  
     0.775
SDP60542.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
  
     0.775
SDP68459.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
  
     0.775
SDP81407.1
Trimethylamine---corrinoid protein Co-methyltransferase.
  
     0.775
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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