STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO58407.1Glycosyltransferase family 10 (fucosyltransferase) C-term. (397 aa)    
Predicted Functional Partners:
SDP21654.1
Methyltransferase domain-containing protein.
  
     0.714
SDO62924.1
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
     0.660
SDP37520.1
N-acetylglutamate synthase, GNAT family; Belongs to the acetyltransferase family.
  
     0.641
SDO49230.1
Outer membrane protein TolC.
  
     0.633
SDO84945.1
Hypothetical protein.
  
     0.633
SDO74275.1
Fimbrial assembly protein (PilN).
  
     0.631
SDP18236.1
Hypothetical protein.
  
     0.591
SDP71810.1
Hypothetical protein.
  
     0.551
SDO39157.1
Autotransporter translocation and assembly factor TamB.
  
     0.543
SDP37737.1
Hypothetical protein.
  
     0.518
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.