STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO65713.1Nucleotide-binding universal stress protein, UspA family. (131 aa)    
Predicted Functional Partners:
SDO65686.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
       0.623
SDO65657.1
Branched-chain amino acid transport system substrate-binding protein.
 
     0.602
SDO65741.1
Long-chain acyl-CoA synthetase.
       0.592
SDP40198.1
Transposase.
  
     0.477
SDP12227.1
PAS domain S-box-containing protein.
  
   
 0.472
SDO65624.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.450
SDP33817.1
Biotin transport system permease protein.
 
     0.441
SDO65057.1
Rubrerythrin.
 
    0.431
SDO63011.1
CBS domain.
 
    0.404
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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