STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO68689.1Putative spermidine/putrescine transport system permease protein. (296 aa)    
Predicted Functional Partners:
SDO68735.1
Spermidine/putrescine transport system permease protein.
 
0.997
SDO68654.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.989
SDO68626.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
 0.987
SDP46124.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.977
SDP46145.1
Putative spermidine/putrescine transport system permease protein.
 
 
0.929
SDO39015.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.896
SDO56991.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
  0.701
SDP46187.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
  
  0.650
SDO66814.1
Tungstate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
 0.605
SDO58021.1
NitT/TauT family transport system ATP-binding protein.
  
  0.592
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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