STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO72265.1Glutamate dehydrogenase. (1047 aa)    
Predicted Functional Partners:
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.863
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
     
 0.746
SDO58159.1
ParB-like nuclease domain-containing protein.
  
     0.719
SDP36394.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
 
 
  0.703
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.662
SDP02988.1
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
    
  0.655
SDP60451.1
Branched-chain amino acid transport system substrate-binding protein.
  
     0.653
SDO39919.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
     
 0.648
SDO44462.1
Glutamine synthetase.
     
 0.645
SDO88999.1
Branched-chain amino acid transport system substrate-binding protein.
  
     0.630
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.