STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO73125.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
SDP03472.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
  
 0.802
SDP74585.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.802
SDO80666.1
Heme-degrading monooxygenase HmoA.
 
     0.629
SDO41018.1
Glycerophosphoryl diester phosphodiesterase.
    
  0.579
SDO73098.1
Zein-binding.
       0.565
SDP15290.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
 
   0.437
SDP51913.1
Nucleotide-binding universal stress protein, UspA family.
 
    0.403
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.