STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO76357.1Predicted glycosyl transferase. (414 aa)    
Predicted Functional Partners:
SDO76326.1
Glycosyltransferase involved in cell wall bisynthesis.
     0.962
SDO76228.1
Hypothetical protein.
     0.934
SDO76077.1
MacB-like core domain-containing protein.
 
     0.811
SDO76293.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
 
     0.810
SDO76130.1
FtsX-like permease family protein.
 
    0.804
SDO76266.1
Predicted glycosyl transferase.
 
    
0.802
SDP21328.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.801
SDO87872.1
ABC-type multidrug transport system, ATPase and permease component.
 
   
 0.786
SDO75693.1
Small-conductance mechanosensitive channel.
 
     0.750
SDO87897.1
Cyclic nucleotide-binding domain-containing protein.
 
     0.735
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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