STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO79319.1Thiol peroxidase, atypical 2-Cys peroxiredoxin. (207 aa)    
Predicted Functional Partners:
SDP51767.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.780
SDP63132.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.503
cysS
cysteinyl-tRNA synthetase.
  
  
 0.499
SDP66823.1
Iron (metal) dependent repressor, DtxR family.
  
  
 0.492
SDO81756.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.482
SDP74287.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
   
    0.472
SDO46532.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.458
SDO79344.1
Pimeloyl-ACP methyl ester carboxylesterase.
     
 0.451
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
 
 0.438
SDO40663.1
4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis.
   
 
 0.426
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.