Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDO47071.1 | SDO81362.1 | SAMN05660330_00319 | SAMN05660330_01103 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cyclic nucleotide-binding domain-containing protein. | 0.916 |
| SDO47071.1 | SDP02747.1 | SAMN05660330_00319 | SAMN05660330_01613 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.916 |
| SDO47071.1 | SDP29896.1 | SAMN05660330_00319 | SAMN05660330_02339 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hpt domain-containing protein. | 0.565 |
| SDO47071.1 | SDP80432.1 | SAMN05660330_00319 | SAMN05660330_04180 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.443 |
| SDO47071.1 | SDP81262.1 | SAMN05660330_00319 | SAMN05660330_04209 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Polar amino acid transport system substrate-binding protein. | 0.403 |
| SDO47071.1 | rpoA | SAMN05660330_00319 | SAMN05660330_02273 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
| SDO47071.1 | rpoB | SAMN05660330_00319 | SAMN05660330_02241 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
| SDO47071.1 | rpoC | SAMN05660330_00319 | SAMN05660330_02242 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
| SDO47071.1 | rpoZ | SAMN05660330_00319 | SAMN05660330_02050 | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.966 |
| SDO81362.1 | SDO47071.1 | SAMN05660330_01103 | SAMN05660330_00319 | Cyclic nucleotide-binding domain-containing protein. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.916 |
| SDO81362.1 | SDP02348.1 | SAMN05660330_01103 | SAMN05660330_01598 | Cyclic nucleotide-binding domain-containing protein. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.916 |
| SDO81362.1 | SDP02747.1 | SAMN05660330_01103 | SAMN05660330_01613 | Cyclic nucleotide-binding domain-containing protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.856 |
| SDO81362.1 | SDP29896.1 | SAMN05660330_01103 | SAMN05660330_02339 | Cyclic nucleotide-binding domain-containing protein. | Hpt domain-containing protein. | 0.830 |
| SDO81362.1 | SDP80432.1 | SAMN05660330_01103 | SAMN05660330_04180 | Cyclic nucleotide-binding domain-containing protein. | Signal transduction histidine kinase. | 0.811 |
| SDO81362.1 | SDP81262.1 | SAMN05660330_01103 | SAMN05660330_04209 | Cyclic nucleotide-binding domain-containing protein. | Polar amino acid transport system substrate-binding protein. | 0.801 |
| SDO81362.1 | rpoA | SAMN05660330_01103 | SAMN05660330_02273 | Cyclic nucleotide-binding domain-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.950 |
| SDO81362.1 | rpoB | SAMN05660330_01103 | SAMN05660330_02241 | Cyclic nucleotide-binding domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.950 |
| SDO81362.1 | rpoC | SAMN05660330_01103 | SAMN05660330_02242 | Cyclic nucleotide-binding domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.943 |
| SDO81362.1 | rpoZ | SAMN05660330_01103 | SAMN05660330_02050 | Cyclic nucleotide-binding domain-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.940 |
| SDP02348.1 | SDO81362.1 | SAMN05660330_01598 | SAMN05660330_01103 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Cyclic nucleotide-binding domain-containing protein. | 0.916 |
page 1 of 5