STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP09924.1Transcriptional regulator, Crp/Fnr family. (221 aa)    
Predicted Functional Partners:
SDO67410.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
 
 0.829
SDP29896.1
Hpt domain-containing protein.
  
 0.785
SDP80432.1
Signal transduction histidine kinase.
   
 0.768
SDP81262.1
Polar amino acid transport system substrate-binding protein.
  
 0.766
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.762
SDP75706.1
PAS domain S-box-containing protein.
  
 0.757
SDP37082.1
Adenylate cyclase, class 3.
  
 0.754
SDP51490.1
Signal transduction histidine kinase.
  
 0.748
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.728
SDP02747.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
  
 0.717
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.