STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP13485.1NADPH-dependent glutamate synthase beta chain. (597 aa)    
Predicted Functional Partners:
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
 0.999
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
SDP13463.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.996
SDP49535.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
 0.995
SDP55495.1
NADH-quinone oxidoreductase subunit F.
 
 0.994
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 0.994
SDP73544.1
NADH-quinone oxidoreductase subunit C.
  
 0.994
SDP57049.1
Sulfide dehydrogenase (flavoprotein) subunit SudB.
 0.991
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
 
0.989
SDP32409.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
 0.988
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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