STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP14403.1Zinc transport system ATP-binding protein. (264 aa)    
Predicted Functional Partners:
SDP14439.1
Zinc transport system permease protein.
 0.999
SDP14372.1
Zinc transport system substrate-binding protein.
 
 
 0.998
SDP23678.1
Energy-coupling factor transport system ATP-binding protein.
 
   
0.914
SDP33841.1
Biotin transport system ATP-binding protein.
 
   
0.903
SDP14461.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
 
  
 0.856
SDP66823.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.752
SDO56991.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.654
SDO67089.1
Tungstate/molybdate binding protein.
 
  
 0.620
SDO97301.1
Iron complex transport system ATP-binding protein.
 
  
0.601
SDP53720.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.591
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.