Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDP15485.1 | SDP16687.1 | SAMN05660330_01960 | SAMN05660330_01963 | Signal transduction histidine kinase. | Transposase zinc-ribbon domain-containing protein. | 0.752 |
SDP15485.1 | SDP29896.1 | SAMN05660330_01960 | SAMN05660330_02339 | Signal transduction histidine kinase. | Hpt domain-containing protein. | 0.999 |
SDP15485.1 | SDP36473.1 | SAMN05660330_01960 | SAMN05660330_02526 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDP15485.1 | SDP51490.1 | SAMN05660330_01960 | SAMN05660330_03012 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDP15485.1 | SDP75706.1 | SAMN05660330_01960 | SAMN05660330_03966 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDP15485.1 | SDP80387.1 | SAMN05660330_01960 | SAMN05660330_04177 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDP15485.1 | SDP80432.1 | SAMN05660330_01960 | SAMN05660330_04180 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SDP15485.1 | SDP81262.1 | SAMN05660330_01960 | SAMN05660330_04209 | Signal transduction histidine kinase. | Polar amino acid transport system substrate-binding protein. | 0.999 |
SDP15485.1 | SDP82342.1 | SAMN05660330_01960 | SAMN05660330_04260 | Signal transduction histidine kinase. | Regulatory protein, luxR family. | 0.999 |
SDP15485.1 | SDP82951.1 | SAMN05660330_01960 | SAMN05660330_04290 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDP16687.1 | SDP15485.1 | SAMN05660330_01963 | SAMN05660330_01960 | Transposase zinc-ribbon domain-containing protein. | Signal transduction histidine kinase. | 0.752 |
SDP16687.1 | SDP29896.1 | SAMN05660330_01963 | SAMN05660330_02339 | Transposase zinc-ribbon domain-containing protein. | Hpt domain-containing protein. | 0.888 |
SDP16687.1 | SDP36473.1 | SAMN05660330_01963 | SAMN05660330_02526 | Transposase zinc-ribbon domain-containing protein. | Signal transduction histidine kinase. | 0.795 |
SDP16687.1 | SDP51490.1 | SAMN05660330_01963 | SAMN05660330_03012 | Transposase zinc-ribbon domain-containing protein. | Signal transduction histidine kinase. | 0.837 |
SDP16687.1 | SDP75706.1 | SAMN05660330_01963 | SAMN05660330_03966 | Transposase zinc-ribbon domain-containing protein. | PAS domain S-box-containing protein. | 0.849 |
SDP16687.1 | SDP80387.1 | SAMN05660330_01963 | SAMN05660330_04177 | Transposase zinc-ribbon domain-containing protein. | PAS domain S-box-containing protein. | 0.737 |
SDP16687.1 | SDP80432.1 | SAMN05660330_01963 | SAMN05660330_04180 | Transposase zinc-ribbon domain-containing protein. | Signal transduction histidine kinase. | 0.813 |
SDP16687.1 | SDP81262.1 | SAMN05660330_01963 | SAMN05660330_04209 | Transposase zinc-ribbon domain-containing protein. | Polar amino acid transport system substrate-binding protein. | 0.860 |
SDP16687.1 | SDP82342.1 | SAMN05660330_01963 | SAMN05660330_04260 | Transposase zinc-ribbon domain-containing protein. | Regulatory protein, luxR family. | 0.776 |
SDP16687.1 | SDP82951.1 | SAMN05660330_01963 | SAMN05660330_04290 | Transposase zinc-ribbon domain-containing protein. | PAS domain S-box-containing protein. | 0.753 |
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