STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP18366.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (418 aa)    
Predicted Functional Partners:
SDP18349.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.998
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.878
SDP03621.1
Putative Zn-dependent protease, contains TPR repeats.
 
 
 
 0.836
SDO50369.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
 
   
 0.807
SDP18388.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
  
 0.762
SDP65509.1
Predicted methyltransferase, contains TPR repeat.
 
 
 
 0.723
SDO45625.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.693
SDP04130.1
Lipopolysaccharide export system permease protein.
  
     0.681
SDP25770.1
Tetratricopeptide repeat-containing protein.
 
 
 0.655
SDP02536.1
Protein of unknown function.
  
     0.641
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.