STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP22277.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (246 aa)    
Predicted Functional Partners:
SDO88198.1
Xanthine dehydrogenase accessory factor.
   
   0.926
SDP30327.1
Cysteine desulfurase family protein.
   
   0.926
SDP42049.1
Xanthine dehydrogenase accessory factor.
   
   0.926
SDP69026.1
Xanthine dehydrogenase accessory factor.
   
   0.926
clsA
Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
 
 0.738
SDP02320.1
4-alpha-glucanotransferase.
    
 0.683
SDP51435.1
Amylosucrase.
  
 
 0.666
SDP58903.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.655
SDP62845.1
Exodeoxyribonuclease-3.
  
 
 0.642
SDO74912.1
Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family.
    
 0.638
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.