STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP22317.1Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family. (267 aa)    
Predicted Functional Partners:
SDP22345.1
Polar amino acid transport system permease protein.
 0.997
SDP13171.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.990
SDP13120.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.986
SDP33960.1
Polar amino acid transport system permease protein.
 0.986
SDP22378.1
Polar amino acid transport system ATP-binding protein.
 0.965
SDO38109.1
General L-amino acid transport system permease protein.
 0.943
SDP33990.1
Polar amino acid transport system ATP-binding protein.
 0.877
SDO38078.1
General L-amino acid transport system ATP-binding protein.
 0.870
SDP33671.1
General L-amino acid transport system ATP-binding protein.
 0.869
SDP33705.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.819
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.