STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP23556.1Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family. (318 aa)    
Predicted Functional Partners:
SDP23533.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 0.998
SDP23635.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
 0.990
SDP60118.1
Protein TorT.
  
 0.938
SDP42547.1
Transcriptional regulator, LacI family.
 
 
 0.891
SDP22510.1
Nucleoside ABC transporter ATP-binding protein.
 
  
  0.684
SDP23585.1
CoA-substrate-specific enzyme activase, putative.
       0.635
SDP23609.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
 
     0.551
SDO59433.1
Carbon starvation protein CstA.
  
    0.485
SDP51416.1
Fructokinase.
 
  
 0.456
SDO35374.1
ATPase components of ABC transporters with duplicated ATPase domains.
    
 0.451
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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