STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP29938.1Sulfate permease, SulP family. (399 aa)    
Predicted Functional Partners:
SDO57668.1
DNA repair exonuclease SbcCD nuclease subunit.
  
   0.901
SDO82064.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 
 0.784
SDP74195.1
Cytochrome b subunit of the bc complex.
    
 
 0.784
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.782
SDP29975.1
Molybdenum storage protein.
 
     0.758
SDP56773.1
NADH dehydrogenase subunit M.
  
 
 0.726
SDP73396.1
NADH dehydrogenase subunit M.
  
 
 0.726
SDP37082.1
Adenylate cyclase, class 3.
  
 0.698
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.653
SDO57456.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 
 0.626
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.