STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP34750.1Cytolysin-activating lysine-acyltransferase. (201 aa)    
Predicted Functional Partners:
SDP34694.1
ATP-binding cassette, subfamily B, HlyB/CyaB.
 
   
 0.928
SDP34719.1
Hemolysin D.
 
   
 0.927
SDP34777.1
Outer membrane efflux protein.
 
  
 0.865
SDP09869.1
Haloacid dehalogenase-like hydrolase.
  
     0.747
SDP40328.1
Uncharacterised nucleotidyltransferase.
  
     0.734
SDO47236.1
DivIVA domain-containing protein.
  
     0.653
SDP09902.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.630
SDO58657.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.611
SDO84945.1
Hypothetical protein.
 
  
 0.602
SDP02536.1
Protein of unknown function.
  
     0.590
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.