STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP36394.1Delta-1-pyrroline-5-carboxylate dehydrogenase. (546 aa)    
Predicted Functional Partners:
SDP58650.1
L-proline dehydrogenase.
 0.986
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.821
SDO49842.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.782
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.774
SDP65822.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.764
SDO39891.1
NADPH-dependent glutamate synthase beta chain.
  
 0.755
SDO39919.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
  
 
 0.728
SDO99176.1
Aspartate aminotransferase.
   
 0.721
SDO57456.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.715
SDO74046.1
Sulfinoalanine decarboxylase.
   
 0.710
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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