STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP36675.1Ni/Fe-hydrogenase 2 integral membrane subunit HybB. (420 aa)    
Predicted Functional Partners:
SDP36698.1
Fe-S-cluster-containing dehydrogenase component.
 0.986
SDO72770.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
 
 0.901
SDP15227.1
Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.866
SDO87263.1
Tetraheme cytochrome c subunit of nitrate or TMAO reductase.
 
   
 0.855
SDP53130.1
Ni/Fe-hydrogenase 2 integral membrane subunit HybB.
  
   
 0.823
SDO72167.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 0.813
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.752
tuf-2
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.752
SDP09475.1
Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.742
SDP53151.1
Tetrathionate reductase beta subunit.
 
 0.731
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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