STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP41931.1Aspartate ammonia-lyase. (462 aa)    
Predicted Functional Partners:
SDP67751.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.885
SDO39189.1
L-asparaginase.
  
 
 0.842
SDO99176.1
Aspartate aminotransferase.
    
 0.819
SDP60039.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.793
SDP23378.1
L-asparaginase.
 
 
 0.742
SDO75661.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.716
SDP22646.1
Arginase; Belongs to the arginase family.
   
 0.716
SDP23435.1
Hypothetical protein.
 
      0.696
SDP13463.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.675
SDO57848.1
Pyruvate carboxylase subunit B.
    
 0.655
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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