Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDP29484.1 | SDP32409.1 | SAMN05660330_02321 | SAMN05660330_02405 | Uracil permease. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.778 |
SDP29484.1 | SDP42088.1 | SAMN05660330_02321 | SAMN05660330_02718 | Uracil permease. | Amidohydrolase family protein. | 0.766 |
SDP29484.1 | carA | SAMN05660330_02321 | SAMN05660330_01364 | Uracil permease. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.868 |
SDP29484.1 | carB | SAMN05660330_02321 | SAMN05660330_01365 | Uracil permease. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.869 |
SDP29484.1 | pyrB | SAMN05660330_02321 | SAMN05660330_02647 | Uracil permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.913 |
SDP29484.1 | pyrD | SAMN05660330_02321 | SAMN05660330_01328 | Uracil permease. | Dihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.778 |
SDP29484.1 | pyrE | SAMN05660330_02321 | SAMN05660330_01465 | Uracil permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.884 |
SDP29484.1 | pyrF | SAMN05660330_02321 | SAMN05660330_00577 | Uracil permease. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.887 |
SDP29484.1 | pyrR | SAMN05660330_02321 | SAMN05660330_03399 | Uracil permease. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.899 |
SDP32409.1 | SDP29484.1 | SAMN05660330_02405 | SAMN05660330_02321 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Uracil permease. | 0.778 |
SDP32409.1 | SDP42088.1 | SAMN05660330_02405 | SAMN05660330_02718 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Amidohydrolase family protein. | 0.784 |
SDP32409.1 | carA | SAMN05660330_02405 | SAMN05660330_01364 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.877 |
SDP32409.1 | carB | SAMN05660330_02405 | SAMN05660330_01365 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.933 |
SDP32409.1 | pyrB | SAMN05660330_02405 | SAMN05660330_02647 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.914 |
SDP32409.1 | pyrE | SAMN05660330_02405 | SAMN05660330_01465 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.943 |
SDP32409.1 | pyrF | SAMN05660330_02405 | SAMN05660330_00577 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.934 |
SDP32409.1 | pyrR | SAMN05660330_02405 | SAMN05660330_03399 | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.838 |
SDP42088.1 | SDP29484.1 | SAMN05660330_02718 | SAMN05660330_02321 | Amidohydrolase family protein. | Uracil permease. | 0.766 |
SDP42088.1 | SDP32409.1 | SAMN05660330_02718 | SAMN05660330_02405 | Amidohydrolase family protein. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.784 |
SDP42088.1 | SDP67992.1 | SAMN05660330_02718 | SAMN05660330_03665 | Amidohydrolase family protein. | Hypothetical protein. | 0.698 |
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