STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP43776.1Hypothetical protein. (483 aa)    
Predicted Functional Partners:
SDP63041.1
Cytochrome c oxidase subunit 4.
   
 0.901
SDO72167.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 0.880
SDO72770.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 0.880
SDP62818.1
Sulfate adenylyltransferase.
     
 0.739
SDP55530.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.733
SDP46002.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.722
SDP55891.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.722
SDP66403.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.722
SDO82531.1
Glyoxylase, beta-lactamase superfamily II.
  
 
 0.674
SDO34739.1
Anaerobic dimethyl sulfoxide reductase subunit B (DMSO reductase iron-sulfur subunit).
     
 0.662
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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