STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP46282.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SDP46255.1
Two-component system, NtrC family, sensor kinase.
       0.789
SDP46233.1
Response regulator receiver domain-containing protein.
       0.784
SDP46305.1
PAS domain S-box-containing protein.
  
    0.770
SDP46212.1
Hypothetical protein.
  
    0.735
SDP46330.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
       0.553
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
  
 0.512
SDP02988.1
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.449
SDP46124.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.411
SDP46145.1
Putative spermidine/putrescine transport system permease protein.
       0.411
SDP46162.1
Putative spermidine/putrescine transport system permease protein.
       0.411
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.