STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP48823.1Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. (350 aa)    
Predicted Functional Partners:
SDP48898.1
Lipid biosynthesis B12-binding/radical SAM protein.
 
  
 0.907
SDP19023.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
  
  
  0.879
SDP48930.1
Hypothetical protein.
 
     0.851
SDP48875.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
 
  
 0.850
SDP48952.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.825
SDP48696.1
All-trans-retinol 13,14-reductase.
 
     0.795
SDP81052.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.763
SDP48780.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.758
SDP48847.1
Hypothetical protein.
       0.752
SDP48979.1
Acyl carrier protein.
 
    0.740
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.