STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP49687.1Isoquinoline 1-oxidoreductase, beta subunit. (714 aa)    
Predicted Functional Partners:
SDP49710.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.997
SDP42144.1
Purine hydroxylase delta subunit apoprotein.
 0.954
SDO88365.1
Purine hydroxylase delta subunit apoprotein.
 0.934
SDP41970.1
Carbon-monoxide dehydrogenase small subunit.
 0.926
SDO34289.1
Carbon-monoxide dehydrogenase small subunit.
 0.922
SDP32335.1
Carbon-monoxide dehydrogenase small subunit.
 0.818
SDO49507.1
Carbon-monoxide dehydrogenase small subunit.
 
 0.733
SDP63208.1
Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family.
 0.690
SDO34322.1
Carbon-monoxide dehydrogenase medium subunit.
  
 0.633
SDO49543.1
CO or xanthine dehydrogenase, FAD-binding subunit.
  
 0.633
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.